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DMT-2′Fluoro-dU Phosphoramidite

DMT-2′Fluoro-dU Phosphoramidite Structure
CAS No.
146954-75-8
Chemical Name:
DMT-2′Fluoro-dU Phosphoramidite
Synonyms
2‘-F-U amidite;2'-Fluoro-dU CEP;2’-F-dU Amidite;2’-F-rUPhosphoramidite;2'-F-U Phosphoramidite;2'-F-dU Phosphoramidite;5'-O-DMT-2'-fluoro-dU-CE;5'-O-DMT-2'-F-dU-3'-CEDPA;2'-Fluoro Uridine Amidite;2'-Fluoro Uridine Amidite
CBNumber:
CB8500324
Molecular Formula:
C39H46FN4O8P
Molecular Weight:
748.78
MOL File:
146954-75-8.mol
MSDS File:
SDS
Modify Date:
2024/7/24 9:14:08

DMT-2′Fluoro-dU Phosphoramidite Properties

storage temp. Sealed in dry,Store in freezer, under -20°C
form powder
pka 9.39±0.10(Predicted)
color white to off-white
InChIKey HQHQPAYRJJMYQX-YOKGOYKLNA-N
SMILES N1(C=CC(=O)NC1=O)[C@@H]1O[C@H](COC(C2=CC=CC=C2)(C2C=CC(=CC=2)OC)C2=CC=C(C=C2)OC)[C@@H](OP(OCCC#N)N(C(C)C)C(C)C)[C@H]1F |&1:8,10,36,51,r|

SAFETY

Risk and Safety Statements

WGK Germany  3

DMT-2′Fluoro-dU Phosphoramidite price More Price(9)

Manufacturer Product number Product description CAS number Packaging Price Updated Buy
Sigma-Aldrich(India) U211280 DMT-2′Fluoro-dU Phosphoramidite configured for PerkinElmer, configured for Polygen 146954-75-8 0.25G ₹6083.65 2022-06-14 Buy
Sigma-Aldrich(India) U211280 DMT-2′Fluoro-dU Phosphoramidite configured for PerkinElmer, configured for Polygen 146954-75-8 1G ₹17006.08 2022-06-14 Buy
Sigma-Aldrich(India) U211280 DMT-2′Fluoro-dU Phosphoramidite configured for PerkinElmer, configured for Polygen 146954-75-8 2G ₹35603.43 2022-06-14 Buy
Sigma-Aldrich(India) U211250 DMT-2′Fluoro-dU Phosphoramidite configured for (?KTA? and OligoPilot?) 146954-75-8 1G ₹17006.08 2022-06-14 Buy
Sigma-Aldrich(India) U211250 DMT-2′Fluoro-dU Phosphoramidite configured for (?KTA? and OligoPilot?) 146954-75-8 5G ₹94264.1 2022-06-14 Buy
Product number Packaging Price Buy
U211280 0.25G ₹6083.65 Buy
U211280 1G ₹17006.08 Buy
U211280 2G ₹35603.43 Buy
U211250 1G ₹17006.08 Buy
U211250 5G ₹94264.1 Buy

DMT-2′Fluoro-dU Phosphoramidite Chemical Properties,Uses,Production

Uses

5'-O-DMT-2'-F-Deoxyuridine-CE Phosphoramidite (DMT-2′Fluoro-dU Phosphoramidite) is a uridine phosphoramidite consisting of a fluorine in the 2' position, and the compound is used in the synthesis of DNA.

Definition

DMT-2′Fluoro-dU Phosphoramidite is also known as 2'-F-U CE-Phosphoramidite. 2'-F-RNA oligonucleotides adopt an A-form helix on hybridisation to a target. Whereas a hydroxyl group of RNA is a hydrogen bond donor, fluorine appears to be a weak acceptor. These features of 2'-F-RNA oligonucleotides lead to certain interesting properties. For example, it was demonstrated that oligonucleotides hybridise to a RNA oligonucleotide in the following order of increasing stability: DNA < RNA < 2'-OMe-RNA < 2'-F-RNA

Synthesis

5'-O-(4,4'-Dimethoxytrityl)-2'-deoxy-2'-fluorouridine (3.00 g, 5.47 mmol) was dissolved in anhydrous dichloromethane (50 ml) under an argon atmosphere, N,N-diisopropylethylamine (0.55 ml,3.18 mmol), 1H-tetrazole (0.45 g, 6.45 mmol) and 2-cyanoethyl-N,N,N',N'-tetraisopropylphosphordiamidite (1.92 g, 6.36mmol) were added. And the mixture was stirred at room temperature overnight. The completion of the reaction was confirmed, 5 percent aqueous sodium hydrogen carbonate solution (20 ml) was added to the reaction mixture to allow layer separation, and the organic layer was washed with saturated brine (20 ml). The organic layer was dried over sodium sulfate, the filtrate was concentrated and the obtained crude product was purified by silica gel chromatography (hexane:ethyl acetate=75:25 - 30/70(v/v), containing 3percent triethylamine). The object fractions were collected and concentratedto give DMT-2′Fluoro-dU Phosphoramidite (2.76 g, 67.3 percent).

DMT-2′Fluoro-dU Phosphoramidite Preparation Products And Raw materials

Raw materials

Preparation Products

DMT-2′Fluoro-dU Phosphoramidite Suppliers

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2'-Fluoro-5'-O-DMT-2'-deoxyuridine-3'-CE-Phosphoramidite 5'-DMT-2'-F-rU Phosphoramidite DMT-2'-F-DU AMIDITE 0.25G, AB, SINGLE DMT-2'-F-dU Amidite 0.25g, 89, Single 2’-F-rUPhosphoramidite 5'-O-(4,4-Dimethoxytrityl)-2'-deoxy-2'-fluorouridine-3'-(2-cyanoethyl-N,N-diisopropyl)phosphoramidite 5'-O-DMT-2'-F-dU-3'-CEDPA 2'-F-dU Phosphoramidite 2'-Deoxy-2'-fluoro-5'-O-DMT-Uridine-3'-CED PhosphoraMidite DMT-2′Fluoro-dU Phosphoramidite 3-({[(2-{[BIS(4-METHOXYPHENYL)(PHENYL)METHOXY]METHYL}-5-(2,4-DIOXO-3H-PYRIMIDIN-1-YL)-4-FLUOROOXOLAN 5'-O-(4,4'-Dimethoxytrityl)-2'-deoxy-2'-fluorouridine-3'-O-[(2-cyanoethyl)(N,N-diisopropyl)]phosphoramidite 2'-Deoxy-2'-fluoro-5'-O-DMT-Uridine Phosphoramidite 5'-O-DMT-2'-Fluoro-2'-deoxyuridine 3'-CE phosphoramidite 2'-Fluoro-dU CEP Uridine, 5'-O-[bis(4-methoxyphenyl)phenylmethyl]-2'-deoxy-2'-fluoro-, 3'-[2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite] 5'-Dimethoxytrityl-deoxyUridine, 2'-fluoro-3'-[(2-cyanoethyl)-(N,N-diisopropyl)]-phosphoramidite 2'-Fluoro-N2-Isobutyryl-5'-O-DMT-2'-Deoxyguanosine-3'-CE-Phosphoramidite 5'-DMTr-2'-F-3'-O-CEP-URIDINE 5'-O-DMT-2'-F-Deoxyuridine-CE Phosphoramidite 5'-O-DMT-2'-F-Deoxyuridine-CE Phosphoramidit 2‘-F-U amidite DMT-2'-F-U Phosphoramidite DMT-2’-F-dU-CE Phosphoramidite 5'-O-DMT-2'-fluoro-dU-CE Inhibitor,Nucleoside Antimetabolite/Analog,DMT2′FluorodU Phosphoramidite,inhibit,DMT 2′Fluoro dU Phosphoramidite 5'-O-DMT-2'-F-2'-Deoxy Uridine -3’-Cyanoethyl Phosphoramidite 2'-Fluoro Uridine Amidite 3-[[(2R,3R,4R,5R)-2-[[bis(4-methoxyphenyl)-phenyl-methoxy]methyl]-5-(2,4-dioxopyrimidin-1-yl)-4-fluoro-tetrahydrofuran-3-yl]oxy-(diisopropylamino)phosphanyl]oxypropanenitrile DMTr-2'-F-dU-3'-CE-Phosphoramidite 2’-F-dU Amidite 5'-O-(4, 4'-dimethoxytrityl)-2'-fluoro-2'-deoxyuridine-3'-CE-Phosphoramidite 5'-ODMT-2'-Fluoro uridine-3'-OCEPA 2'-F-U Phosphoramidite DMT-2'-F-dU-CE Phosphoramidite 5'-O-(4,4-Dimethoxytrityl)-2'-deoxy-2'-fluorouridine-3'-(2-cyanoethyl-N,N-diisopropyl)phosphoramidite 5'-O-DMT-2'-F-Deoxyuridine-CE Phosphoramidit 2'-Fluoro-2'-deoxy Uridine CED Phosphoramidite 2'-F-5'-O-DMT-2'-dU-3'-CE-Phosphoramidite DMTr-2'-F-dU-3'-CE-Phosphoramidite 5'-O-DMT-2'-fluoro-2'-Deoxyuridine 3'-CE phosphoramidite 5'-O-DMT-2'-F-2'-Deoxy Uridine -3’-Cyanoethyl Phosphoramidite 2'-Fluoro Uridine Amidite DMT-2'FLUORO-DU PHOSPHORAMIDITE Uridine, 5'-O-[bis(4-methoxyphenyl)phenylmethyl]-2'-deoxy-2'-fluoro-, 3'-[2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite 146954-75-8 Amidite